Space non-invariant point-spread function and its estimation in fluorescence microscopy - Inria - Institut national de recherche en sciences et technologies du numérique Access content directly
Reports (Research Report) Year : 2009

Space non-invariant point-spread function and its estimation in fluorescence microscopy

Praveen Pankajakshan
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Zvi Kam
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Josiane Zerubia
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Abstract

In this research report, we recall briefly how the diffraction-limited nature of an optical microscope's objective, and the intrinsic noise can affect the observed images' resolution. A blind deconvolution algorithm can restore the lost frequencies beyond the diffraction limit. However, under other imaging conditions, the approximation of aberration-free imaging, is not applicable, and the phase aberrations of the emerging wavefront from a specimen immersion medium cannot be ignored any more. We show that an object's location and its original intensity distribution can be recovered by retrieving the refracted wavefront's phase from the observed intensity images. We demonstrate this by retrieving the point-spread function from an imaged microsphere. The noise and the influence of the microsphere size can be mitigated and sometimes completely removed from the observed images by using a maximum a posteriori estimate. However, due to the incoherent nature of the acquisition system, phase retrieval from the observed intensities will be possible only if the phase is constrained. We have used geometrical optics to model the phase of the refracted wavefront, and tested the algorithm on some simulated images.
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Dates and versions

inria-00438719 , version 1 (04-12-2009)
inria-00438719 , version 2 (18-12-2009)

Identifiers

  • HAL Id : inria-00438719 , version 2

Cite

Praveen Pankajakshan, Laure Blanc-Féraud, Zvi Kam, Josiane Zerubia. Space non-invariant point-spread function and its estimation in fluorescence microscopy. [Research Report] RR-7157, INRIA. 2009, pp.54. ⟨inria-00438719v2⟩
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