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Rapport (Rapport De Recherche) Année : 2003

A Multi-Site Constraint Programming Model of Alternative Splicing Regulation

Delphine Ropers
Hidde de Jong
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Christiane Branlant
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Résumé

Alternative splicing is a key process in post-transcriptional regulation, by which several kinds of mature RNA can be obtained from the same premessenger RNA. The resulting combinatorial complexity contributes to biological diversity, especially in the case of the human immunodeficiency virus HIV-1. Using a constraint programming approach, we develop a model of the alternative splicing regulation in HIV-1. Our model integrates different scales (single site vs. multiple sites), and thus allows us to exploit several types of experimental data available to us.
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Dates et versions

inria-00071756 , version 1 (23-05-2006)

Identifiants

  • HAL Id : inria-00071756 , version 1

Citer

Damien Eveillard, Delphine Ropers, Hidde de Jong, Christiane Branlant, Alexander Bockmayr. A Multi-Site Constraint Programming Model of Alternative Splicing Regulation. [Research Report] RR-4830, INRIA. 2003. ⟨inria-00071756⟩
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