Major depression is a leading cause of disability due to its trend to recurrence and treatment resistance. Currently, there are no biomarkers which could potentially identify patients with risk of treatment resistance. In this original paper, we propose a two-level shape analysis of the white matter bundles based on the Large Diffeomorphic Deformation Metric Mapping framework, to study treatment resistant depression. Fiber bundles are characterised via the deformation of their center line from a centroid shape. We developed two statistical analyses at a global and a local level to identify the most relevant bundles related to treatment resistant depression. Using a prospective longitudinal cohort including 63 patients. We applied this approach at baseline on 50 white matter fiber-tracts, to predict the clinical improvement at 6 months. Our results show a strong association between three bundles and the clinical improvement 6 months after. More precisely, the rightsided thalamo-occipital fascicle and optic radiations are the most robust followed by the splenium. The present study shows the interest in considering white matter shape in the context of depression, contributing to improve our understanding of neurobiological process of treatment resistance depression.