A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids - Inria - Institut national de recherche en sciences et technologies du numérique Access content directly
Conference Papers Year : 2006

A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids

Abstract

Protein identification is one of the major task of Proteomics researchers. Protein identification could be resumed by searching the best match between an experimental mass spectrum and proteins from a database. Nevertheless this approach can not be used to identify new proteins or protein variants. In this paper an evolutionary approach is proposed to discover new proteins or protein variants thanks a "de novo sequencing" method. This approach has been experimented on a specific grid called Grid5000 with simulated spectra and also real spectra.
Fichier principal
Vignette du fichier
article.pdf (113.99 Ko) Télécharger le fichier
Origin : Files produced by the author(s)
Loading...

Dates and versions

inria-00270867 , version 1 (08-04-2008)

Identifiers

  • HAL Id : inria-00270867 , version 1
  • ARXIV : 0804.1202

Cite

Jean-Charles Boisson, Laetitia Jourdan, El-Ghazali Talbi, Christian Rolando. A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids. AINA 2006, HIPCOMB Workshop, Apr 2006, Vienne, Austria. ⟨inria-00270867⟩
350 View
134 Download

Altmetric

Share

Gmail Facebook Twitter LinkedIn More