HairSplitter: separating similar strains in metagenome assembly - Inria - Institut national de recherche en sciences et technologies du numérique
Poster Communications Year : 2023

HairSplitter: separating similar strains in metagenome assembly

Abstract

Similar regions (typically different strains) get collapsed in a single sequence during genome assembly. HairSplitter separates the collapsed regions to obtain the phased, complete assembly, regardless of the number of haplotypes present and their coverage.
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Dates and versions

hal-04272480 , version 1 (06-11-2023)

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  • HAL Id : hal-04272480 , version 1

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Roland Faure, Jean-François Flot, Dominique Lavenier. HairSplitter: separating similar strains in metagenome assembly. ISMB/ECCB 2023 - 31st Annual Intelligent Systems For Molecular Biology and the 22nd Annual European Conference on Computational Biology, Jul 2023, Lyon, France. pp.1-1, 2023. ⟨hal-04272480⟩
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