Inference of the statistics of a modulated promoter process from population snapshot gene expression data - Inria - Institut national de recherche en sciences et technologies du numérique
Conference Papers Year : 2020

Inference of the statistics of a modulated promoter process from population snapshot gene expression data

Abstract

In previous work, we have developed mathematical tools for the analysis of single-cell gene expression data from population snapshots, and an inference algorithm for the estimation of stationary statistics of promoter activation. In this work, we address the inference problem in the nonstationary case of modulated processes. This is of special relevance to control scenarios, where an exogenous input modulates the time evolution of promoter activation. We provide an effective method for the computation of the output statistics of a reaction network with a nonstationary, causal input process of modulated form. Based on this we devise and demonstrate an algorithm for the reconstruction of the promoter (input) process statistics from snapshot data.
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Dates and versions

hal-03085422 , version 1 (21-12-2020)

Identifiers

  • HAL Id : hal-03085422 , version 1

Cite

Eugenio Cinquemani. Inference of the statistics of a modulated promoter process from population snapshot gene expression data. IFAC-V 2020 - 1st Virtual IFAC World Congress, Jul 2020, Berlin, Germany. pp.1-6. ⟨hal-03085422⟩
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