ecceTERA: Comprehensive gene tree-species tree reconciliation using parsimony
Edwin Jacox
,
Cedric Chauve
,
Gergely J Szöllősi
,
Yann Ponty
,
Celine Scornavacca
Journal articles
hal-01276903v1
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Asymptotic Lattice Path Enumeration Using Diagonals
Stephen Melczer
,
Marni Mishna
Journal articles
hal-01394157v1
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Spectra disentangling applied to the Hyades binary theta2 Tauri AB: new orbit, orbital parallax and component properties
K. B. V. Torres
,
P. Lampens
,
Y. Frémat
,
H. Hensberge
,
Y. Lebreton
,
et al.
Journal articles
hal-01122727v1
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Counting, generating and sampling tree alignments
Cedric Chauve
,
Julien Courtiel
,
Yann Ponty
ALCOB - 3rd International Conference on Algorithms for Computational Biology - 2016 , Jun 2016, Trujillo, Spain. pp.53--64,
⟨10.1007/978-3-319-38827-4_5⟩
Conference papers
hal-01154030v3
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The BRaliBase dent - a tale of benchmark design and interpretation.
Benedikt Löwes
,
Cedric Chauve
,
Yann Ponty
,
Robert Giegerich
Journal articles
hal-01273406v1
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Tableau sequences, open diagrams, and Baxter families
Sophie Burrill
,
Julien Courtiel
,
Eric Fusy
,
Stephen Melczer
,
Marni Mishna
2015
Preprints, Working Papers, ...
hal-01188328v1
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Proceedings of the 1st workshop on Computational Methods for Structural RNAs
Fabrice Jossinet
,
Yann Ponty
,
Jérôme Waldispühl
Books
hal-01071417v1
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Ancestral gene synteny reconstruction improves extant species scaffolding
Yoann Anselmetti
,
Vincent Berry
,
Cedric Chauve
,
Annie Chateau
,
Eric Tannier
,
et al.
Journal articles
hal-01180303v2
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A new combinatorial identity for unicellular maps, via a direct bijective approach
Chapuy Guillaume
Journal articles
hal-00713476v1
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Effective Coefficient Asymptotics of Multivariate Rational Functions via Semi-Numerical Algorithms for Polynomial Systems
Stephen Melczer
,
Bruno Salvy
Journal articles
hal-02185586v1
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Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models
Cedric Chauve
,
Yann Ponty
,
Michael Wallner
Journal articles
hal-02169271v1
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Taming reluctant random walks in the positive quadrant
Jeremie Lumbroso
,
Marni Mishna
,
Yann Ponty
GASCOM - 10th conference on random generation of combinatorial structures - 2016 , Jun 2016, Bastia, France. pp.99 -- 114,
⟨10.1016/j.endm.2017.05.008⟩
Conference papers
hal-01291164v1
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A hybrid combinatorial method for docking single stranded RNAs in a protein pockect at the thermodynamic equilibrium
Chinmay Singhal
,
Yann Ponty
,
Isaure Chauvot de Beauchêne
JOBIM (Journées Ouvertes en Biologie, Informatique et Mathématiques) , Jul 2018, Marseille, France
Conference papers
hal-02394529v1
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Inferring Positional Homologs with Common Intervals of Sequences
Guillaume Blin
,
Annie Chateau
,
Cedric Chauve
,
Yannick Gingras
4th Annual RECOMB Satellite Workshop on Comparative Genomics (RECOMB-CG'06) , Sep 2006, Montreal, Canada. pp.24-38
Conference papers
hal-00620367v1
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BRASERO: A resource for benchmarking RNA secondary structure comparison algorithms
Julien Allali
,
Cédric Saule
,
Cedric Chauve
,
Yves d'Aubenton-Carafa
,
Alain Denise
,
et al.
Journal articles
hal-00647725v1
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Lattice Walks in Cones: Combinatorial and Probabilistic Aspects
Amélie Trotignon
Combinatorics [math.CO]. Université de Tours / Région Centre; Simon Fraser university (Burnaby, Canada), 2019. English.
⟨NNT : ⟩
Theses
tel-02459885v1
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Diagonalization and Rationalization of algebraic Laurent series
Boris Adamczewski
,
Jason P. Bell
Ann. Sci. Éc. Norm. Supér. , 2013, 46 (6), 49 pp
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hal-00698706v1
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A bijection for covered maps, or a shortcut between Harer-Zagier's and Jackson's formulas
Olivier Bernardi
,
Guillaume Chapuy
Journal of Combinatorial Theory, Series A , 2011, 118(6) (6), pp. 1718-1748
Journal articles
hal-00445647v2
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Tableau sequences, open diagrams, and Baxter families
Sophie Burrill
,
Julien Courtiel
,
Eric Fusy
,
Stephen Melczer
,
Marni Mishna
Journal articles
hal-01394155v1
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Comment la reconstruction de génomes ancestraux peut aider à l'assemblage de génomes actuels
Yoann Anselmetti
,
Vincent Berry
,
Cedric Chauve
,
Annie Chateau
,
Eric Tannier
,
et al.
Journées Ouvertes Biologie Informatique Mathématiques , 2016, Lyon, France
Conference papers
hal-01394409v1
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Artin-Schreier extensions of normal bases
David Thomson
,
Colin Weir
WCC2015 - 9th International Workshop on Coding and Cryptography 2015 , Anne Canteaut, Gaëtan Leurent, Maria Naya-Plasencia, Apr 2015, Paris, France
Conference papers
hal-01275782v1
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On oracle-type local recovery guarantees in compressed sensing
Ben Adcock
,
Claire Boyer
,
Simone Brugiapaglia
Information and Inference , 2020
Journal articles
hal-01811947v2
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The breakpoint distance for signed sequences
Guillaume Blin
,
Guillaume Fertin
,
Cedric Chauve
1st Conference on Algorithms and Computational Methods for biochemical and Evolutionary Networks (CompBioNets'04) , Dec 2004, Recife, Brazil, Brazil. pp.3-16
Conference papers
hal-00620356v1
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Genes Order and Phylogenetic Reconstruction: Application to $\gamma$-Proteobacteria
Guillaume Blin
,
Cedric Chauve
,
Guillaume Fertin
3rd Annual RECOMB Satellite Workshop on Comparative Genomics (RECOMB-CG'05) , Sep 2005, Dublin, Ireland, Ireland. pp.11-20
Conference papers
hal-00620362v1
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An approximation algorithm for computing a parsimonious first speciation in the gene duplication model
Aïda Ouangraoua
,
Krister M. Swenson
,
Cedric Chauve
RECOMB-Comparative Genomics , 2010, Canada. pp.290-302
Conference papers
hal-00527624v1
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Discrete harmonic functions in the three-quarter plane
Amélie Trotignon
2020
Preprints, Working Papers, ...
hal-02159567v2
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Multiple asymptotics of kinetic equations with internal states
Benoît Perthame
,
Weiran Sun
,
Min Tang
,
Shugo Yasuda
Journal articles
hal-02194421v1
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High performance SIMD modular arithmetic for polynomial evaluation
Pierre Fortin
,
Ambroise Fleury
,
François Lemaire
,
Michael Monagan
Concurrency and Computation: Practice and Experience , 2021, 33 (16), pp.e6270.
⟨10.1002/cpe.6270⟩
Journal articles
hal-02552673v1
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On walks avoiding a quadrant
Kilian Raschel
,
Amélie Trotignon
The Electronic Journal of Combinatorics , 2019, 26 (3)
Journal articles
hal-01848287v2
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Counting unicellular maps on non-orientable surfaces
Olivier Bernardi
,
Guillaume Chapuy
22nd International Conference on Formal Power Series and Algebraic Combinatorics (FPSAC 2010) , 2010, San Francisco, United States. pp.155-166,
⟨10.46298/dmtcs.2859⟩
Conference papers
hal-01186287v1
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