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The Optimal Noise in Noise-Contrastive Learning Is Not What You Think

Omar Chehab , Alexandre Gramfort , Aapo Hyvärinen
UAI 2022 - 38th Conference on Uncertainty in Artificial Intelligence, Aug 2022, Eindhoven, Netherlands
Conference papers hal-03808351v1
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3D-SPARKLING en IRMf : Application à la rétinotopie

Zaineb Amor , Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Bertrand Thirion , Franck Mauconduit et al.
Preprints, Working Papers, ... hal-03905991v1
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Deep language algorithms predict semantic comprehension from brain activity

Charlotte Caucheteux , Alexandre Gramfort , Jean-Rémi King
Scientific Reports, 2022, ⟨10.1038/s41598-022-20460-9⟩
Journal articles hal-03361426v1
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Prospects of non-Cartesian 3D-SPARKLING encoding for functional MRI: A preliminary case study for retinotopic mapping

Zaineb Amor , Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Bertrand Thirion , Franck Mauconduit et al.
Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, May 2022, London, United Kingdom
Conference papers hal-03901204v1

Intracranial Electrode Location and Analysis in MNE-Python

Alexander Rockhill , Eric Larson , Brittany Stedelin , Alessandra Mantovani , Ahmed Raslan et al.
Journal of Open Source Software, 2022, 7 (70), pp.3897. ⟨10.21105/joss.03897⟩
Journal articles hal-03808209v1

FaDIn: Fast Discretized Inference for Hawkes Processes with General Parametric Kernels

Guillaume Staerman , Cédric Allain , Alexandre Gramfort , Thomas Moreau
Preprints, Working Papers, ... hal-03811810v1
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Comprehensive decoding mental processes from Web repositories of functional brain images

Romuald Menuet , Raphael Meudec , Jérôme Dockès , Gaël Varoquaux , Bertrand Thirion et al.
Scientific Reports, 2022, 12 (7050), ⟨10.1038/s41598-022-10710-1⟩
Journal articles hal-03666470v1
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Neuron modeling, Bloch-Torrey equation, and their application to brain microstructure estimation using diffusion MRI

Chengran Fang
Medical Imaging. Université Paris-Saclay, 2023. English. ⟨NNT : 2023UPASG010⟩
Theses tel-04043104v1
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Accelerated sodium MRI using undersampled 3D SPARKLING at 7T

Renata Porciuncula Baptista , Mathieu Naudin , Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Franck Mauconduit et al.
Preprints, Working Papers, ... hal-03929787v1
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Hybrid learning of Non-Cartesian k-space trajectory and MR image reconstruction networks

Chaithya Giliyar Radhakrishna , Zaccharie Ramzi , Philippe Ciuciu
ISBI 2022 - IEEE 19th International Symposium on Biomedical Imaging, IEEE, Mar 2022, Kolkata, India
Conference papers hal-03394881v1
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Foundational number sense training gains are predicted by hippocampal–parietal circuits

Hyesang Chang , Lang Chen , Yuan Zhang , Ye Xie , Carlo de Los Angeles et al.
Journal of Neuroscience, 2022, 42 (19), pp.JN-RM-1005-21. ⟨10.1523/JNEUROSCI.1005-21.2022⟩
Journal articles hal-03670987v1
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Toward a realistic model of speech processing in the brain with self-supervised learning

Juliette Millet , Charlotte Caucheteux , Pierre Orhan , Yves Boubenec , Alexandre Gramfort et al.
NeurIPS 2022 - 36th Conference on Neural Information Processing Systems, Nov 2022, New Orleans, United States
Conference papers hal-03808200v1
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MORE-SPARKLING: non-cartesian trajectories with minimized off-resonance effects

Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Aurélien Massire , Boris Mailhé , Mariappan Nadar et al.
Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, May 2022, London, United Kingdom
Conference papers hal-03923706v1
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Denoising of FMRI volumes using local low rank methods

Pierre-Antoine Comby , Zaineb Amor , Alexandre Vignaud , Philippe Ciuciu
ISBI 2023 - International Symposium on Biomedical Imaging, Apr 2023, Carthagena de India, Colombia
Conference papers hal-03895194v2
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Predictive usefulness of RT-PCR testing in different patterns of Covid-19 symptomatology: analysis of a French cohort of 12,810 outpatients

Caroline Apra , Charlotte Caucheteux , Arthur Mensch , Jenny Mansour , Mélodie Bernaux et al.
Scientific Reports, 2021, 11, pp.21233. ⟨10.1038/s41598-021-99991-6⟩
Journal articles hal-03895166v1
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3D-SPARKLING for functional MRI: A pilot study for retinotopic mapping at 7T

Zaineb Amor , Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Bertrand Thirion , Franck Mauconduit et al.
OHBM 2022, Jun 2022, Glasgow, United Kingdom
Conference papers hal-03901259v1

Predicting future cognitive decline from non-brain and multimodal brain imaging data in healthy and pathological aging

Bruno Hebling Vieira , Franziskus Liem , Kamalaker Dadi , Denis Engemann , Alexandre Gramfort et al.
Neurobiology of Aging, 2022, 118, pp.55-65. ⟨10.1016/j.neurobiolaging.2022.06.008⟩
Journal articles hal-03808175v1
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Impact of ∆$B_0$ field imperfections correction on BOLD sensitivity in 3D-SPARKLING fMRI data

Zaineb Amor , Caroline Le Ster , Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Bertrand Thirion et al.
ISMRM & ISMRT 2023 - Annual Meeting & Exhibition - Annual Meeting of the International Society for Magnetic Resonance in Medicine, International Society for Magnetic Resonance in Medicine, Jun 2023, Toronto, Canada
Conference papers hal-04052904v1
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Notip: Non-parametric True Discovery Proportion control for brain imaging

Alexandre Blain , Bertrand Thirion , Pierre Neuvial
NeuroImage, 2022, 260, pp.119492. ⟨10.1016/j.neuroimage.2022.119492⟩
Journal articles hal-03649114v3
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Wavelets in the deep learning era

Zaccharie Ramzi , Kevin Michalewicz , Jean-Luc Starck , Thomas Moreau , Philippe Ciuciu et al.
Journal of Mathematical Imaging and Vision, 2022, ⟨10.1007/s10851-022-01123-w⟩
Journal articles hal-03346892v1
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NC-PDNet: a Density-Compensated Unrolled Network for 2D and 3D non-Cartesian MRI Reconstruction

Zaccharie Ramzi , Chaithya Giliyar Radhakrishna , Jean-Luc Starck , Philippe Ciuciu
IEEE Transactions on Medical Imaging, 2022, ⟨10.1109/TMI.2022.3144619⟩
Journal articles hal-03188997v3
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Data augmentation for learning predictive models on EEG: a systematic comparison

Cédric Rommel , Joseph Paillard , Thomas Moreau , Alexandre Gramfort
Journal of Neural Engineering, 2022, ⟨10.1088/1741-2552/aca220⟩
Journal articles hal-03853329v1
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Impact de la correction des imperfections $\Delta B_0$ sur les données IRMf collectées avec 3D-SPARKLING

Zaineb Amor , Caroline Le Ster , Chaithya Giliyar Radhakrishna , Guillaume Daval-Frérot , Nicolas Boulant et al.
Preprints, Working Papers, ... hal-03906004v1
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Inverting brain grey matter models with likelihood-free inference: a tool for trustable cytoarchitecture measurements

Maëliss Jallais , Pedro Luiz Coelho Rodrigues , Alexandre Gramfort , Demian Wassermann
Journal of Machine Learning for Biomedical Imaging, 2022, pp.1-27. ⟨10.48550/arXiv.2111.08693⟩
Journal articles hal-03417406v4
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Scalable Query Answering under Uncertainty to Neuroscientific Ontological Knowledge: The NeuroLang Approach

Gaston E Zanitti , Yamil Soto , Valentin Iovene , Maria Vanina Martinez , Ricardo O Rodriguez et al.
Neuroinformatics, 2022, ⟨10.3389/fninf.2014.00014⟩
Journal articles hal-03187887v3
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Development of a probabilistic domain-specific language for brain connectivity including heterogeneous knowledge representation

Gaston Ezequiel Zanitti
Logic in Computer Science [cs.LO]. Université Paris-Saclay, 2023. English. ⟨NNT : 2023UPASG022⟩
Theses tel-04067126v1

Editorial: From Raw MEG/EEG to Publication: How to Perform MEG/EEG Group Analysis With Free Academic Software

Arnaud Delorme , Robert Oostenveld , Francois Tadel , Alexandre Gramfort , Srikantan Nagarajan et al.
Frontiers in Neuroscience, 2022, 16, ⟨10.3389/fnins.2022.854471⟩
Journal articles hal-03876924v1
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Optimizing full 3D SPARKLING trajectories for high-resolution T2*-weighted Magnetic Resonance Imaging

Chaithya Giliyar Radhakrishna , Pierre Weiss , Guillaume Daval-Frérot , Aurélien Massire , Alexandre Vignaud et al.
IEEE Transactions on Medical Imaging, 2022
Journal articles hal-03090471v2

Evolution of synchronous female bilateral breast cancers and response to treatment

Anne-Sophie Hamy , Judith Abécassis , Keltouma Driouch , Lauren Darrigues , Mathias Vandenbogaert et al.
Nature Medicine, 2023, ⟨10.1038/s41591-023-02216-8⟩
Journal articles hal-04020231v1
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Synthetic FLAIR as a Substitute for FLAIR Sequence in Acute Ischemic Stroke

Joseph Benzakoun , Marc-Antoine Deslys , Laurence Legrand , Ghazi Hmeydia , Guillaume Turc et al.
Radiology, 2022, pp.211394. ⟨10.1148/radiol.211394⟩
Journal articles inserm-03536623v1