Conference Papers Year : 2023

From Nipype to Pydra: a Clinica story

Abstract

Carrying out neuroimaging studies often involves multiple steps requiring different tools. As such it can be difficult to reproduce an experiment. Clinica (Routier et al., 2021) is a software platform that aims at empowering users with an environment to make reproducibility possible. In this abstract, we describe Clinica's migration to Pydra, a modern dataflow engine developed for the Nipype project (https://nipype.github.io/pydra). We also highlight our wider contributions to the Pydra ecosystem which will benefit the community at large.

Keywords

Domains

Medical Imaging
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Dates and versions

hal-04278898 , version 1 (10-11-2023)

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  • HAL Id : hal-04278898 , version 1

Cite

Ghislain Vaillant, Nicolas Gensollen, Matthieu Joulot, Omar El-Rifai, Mauricio Diaz, et al.. From Nipype to Pydra: a Clinica story. OHBM 2023 - Annual meeting of the Organization for Human Brain Mapping, Jul 2023, Montreal, Canada. ⟨hal-04278898⟩
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