The misuse of pesticide and fertilizer take a great pollution to the agricultural environment, which seriously affects the quality and safety of agricultural products. The government put forward a series of policies of subsidy to lead the farmers to proper pesticide application and scientific farming. But the effect doesn’t turn out as it wished to be because of the backward implementation methods and Stat methods. This research provides a Precision Management method for effectively managing subsidies for agriculture. Based on Non-contact IC card, the authors developed a Precision Management System for agricultural related subsidies management. This system was applied in one center and eleven experiment stores in ChangPing district in Beijing and solved problems like poor instruction for planting, tardy in subsidies providing and inaccurate information of stat during the strawberry growing season. Through this system, farmers can get the subsidies and instruction at the moment they buy agricultural materials, government can obtain the accurate data, and then adjustment the policies in time to get the desired effect.