Nowadays collaboration among organizations in the so called Virtual Organizations (VOs) is the most advanced form to make business. Their emergence and growing are closely related to integrated information and communication technology (ICT). One of the promising approaches to carry out the agility and flexibility in VO creation is defined under the assumption of a VO Breeding Environment (VBE). To support such agile organizations, an efficient IT system and methodologies should be set in order to facilitate their daily management activities. Service-oriented software technologies provide promising means to regulate and enforce coordination of cross-organisational business services interactions but lack organizational abstractions and methodology. This paper proposes a framework for collaborative network coordination in the VBEs's context. The proposed framework satisfies flexibility and agility requirements of virtual organization using a multi layer approach combining VBE management systems layer that assist flexible VO creation, a semantic interoperability layer essential for promoting integration on the basis of common language that describe VO concepts and inherent dependencies, and a service oriented layer that introduces the concept of service domain that encapsulates business processes fitting VO requirements.