Formal Concept Analysis Applied to Transcriptomic Data - Inria - Institut national de recherche en sciences et technologies du numérique Access content directly
Conference Papers Year : 2012

Formal Concept Analysis Applied to Transcriptomic Data

Adrien Coulet
Amedeo Napoli


Identifying functions shared by genes responsible for cancer is a challenging task. This paper describes the preparation work for applying Formal Concept Analysis (FCA) to complex biological data. We present here a preliminary experiment using these data on a core context with the addition of domain knowledge. The resulting concept lattices are explored and some interesting concepts are discussed. Our study shows how FCA can help the domain experts in the exploration of complex data.
Fichier principal
Vignette du fichier
ma_cla2012_short.pdf (374.14 Ko) Télécharger le fichier
Origin : Files produced by the author(s)

Dates and versions

hal-00761003 , version 1 (04-12-2012)


  • HAL Id : hal-00761003 , version 1


Mehwish Alam, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone. Formal Concept Analysis Applied to Transcriptomic Data. The Ninth International Conference on Concept Lattices and Their Applications - CLA 2012, Oct 2012, Fuengirola (Málaga), Spain. ⟨hal-00761003⟩
159 View
120 Download


Gmail Facebook Twitter LinkedIn More