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Influence of breeding sites bacterial communities on Aedes aegypti microbiome and vector competence for dengue and Zika viruses

Lyza Hery , Antoine Boullis , Christelle Dollin , Sebastien Breurec , Anubis Vega Rua et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference papers hal-02426561v1

KaruBioNet: a network for a better collaboration and structuring of bioinformatics in Guadeloupe (French West Indies) and the Caribbean

David Couvin , Yann Reynaud
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference papers hal-02424455v1

Molecular epidemiology of Mycobacterium tuberculosis in Baja California, Mexico: A result of human migration?

Carlos A. Flores-López , Roberto Zenteno-Cuevas , Rafael Laniado-Laborín , Yann Reynaud , Rosa Alejandra García-Ortiz et al.
Infection, Genetics and Evolution, 2017, 55, pp.378 - 383. ⟨10.1016/j.meegid.2016.07.001⟩
Journal articles pasteur-01652110v1

Genetic diversity of Mycobacterium tuberculosis clinical isolates from HIV-TB patients from two public hospitals at Bogotá, Colombia

Magda Beltrán-León , Juan Germán Rodríguez-Castillo , Thierry Zozio , Nalin Rastogi , Martha I Murcia et al.
Infection, Genetics and Evolution, 2020, 77, pp.104059. ⟨10.1016/j.meegid.2019.104059⟩
Journal articles hal-02950436v1

Mycobacterium tuberculosis genotypes and predominant clones among the multidrug-resistant isolates in Spain 1998–2005

Sofia Samper , Patricia Gavín , María Isabel Millán-Lou , María José Iglesias , María Soledad Jiménez et al.
Infection, Genetics and Evolution, 2017, 55, pp.117 - 126. ⟨10.1016/j.meegid.2017.08.003⟩
Journal articles pasteur-01652095v1

Tuberculosis - A global emergency: Tools and methods to monitor, understand, and control the epidemic with specific example of the Beijing lineage

David Couvin , Nalin Rastogi
Tuberculosis, 2015, 95 (Supplement 1), pp.S177-S189. ⟨10.1016/⟩
Journal articles pasteur-01154000v1

First insight into the molecular epidemiology of Mycobacterium tuberculosis in Santa Catarina, southern Brazil.

Christiane Lourenço Nogueira , Rodrigo Ivan Prim , Simone Gonçalves Senna , Darcita Büerger Rovaris , Rosemeri Maurici et al.
Tuberculosis, 2016, 97, pp.57-64. ⟨10.1016/⟩
Journal articles pasteur-01305192v1

Circulation of antibiotic resistance genes between bacteria from different origins

M. Pot , Y Reynaud , G. Gruel , S. Ferdinand , Sebastien Breurec et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference poster hal-02434997v1

Macro-geographical specificities of the prevailing tuberculosis epidemic as seen through SITVIT2, an updated version of the Mycobacterium tuberculosis genotyping database

David Couvin , Audrey David , Thierry Zozio , Nalin Rastogi
Infection, Genetics and Evolution, 2019, Molecular aaspects of mycobacterial infections, 72, pp.31-43. ⟨10.1016/j.meegid.2018.12.030⟩
Journal articles pasteur-01986923v1

Human multidrug-resistant Mycobacterium bovis infection in Mexico.

Carlos A Vazquez-Chacon , Armando Martínez-Guarneros , David Couvin , Jorge A González-Y-Merchand , Sandra Rivera-Gutierrez et al.
Tuberculosis, 2015, 95 (6), pp.802-9. ⟨10.1016/⟩
Journal articles pasteur-01304571v1

Finer characterization of Mycobacterium tuberculosis using spoligotyping and 15-loci MIRU-VNTRs reveals phylogeographical specificities of isolates circulating in Guyana and Suriname

Elisabeth Streit , Shirematee Baboolal , Patrick E Akpaka , Julie Millet , Nalin Rastogi et al.
Infection, Genetics and Evolution, 2015, 30, pp.114-119. ⟨10.1016/j.meegid.2014.12.015⟩
Journal articles pasteur-01153550v1

Bayesian population structure analysis reveals presence of phylogeographically specific sublineages within previously ill-defined T group of Mycobacterium tuberculosis

Yann Reynaud , Chao Zheng , Guihui Wu , Qun Sun , Nalin Rastogi et al.
PLoS ONE, 2017, 12 (2), pp.e0171584. ⟨10.1371/journal.pone.0171584⟩
Journal articles pasteur-01652099v1

Insights on the Mycobacterium tuberculosis population structure associated with migrants from Portuguese-speaking countries over a three-year period in Greater Lisbon, Portugal: Implications at the public health level

Catarina Pereira , Pedro Gomes , Ricardo Taveira , Carla Silva , Fernando Maltez et al.
Infection, Genetics and Evolution, 2019, 71, pp.159-165. ⟨10.1016/j.meegid.2019.03.025⟩
Journal articles pasteur-02950193v1

High genetic diversity of extended-spectrum β-lactamases producing Escherichia coli in feces of horses

Syndia Sadikalay , Yann Reynaud , Stéphanie Guyomard-Rabenirina , Mélanie Falord , Célia Ducat et al.
Veterinary Microbiology, 2018, 219, pp.117-122. ⟨10.1016/j.vetmic.2018.04.016⟩
Journal articles hal-02155540v1

Mycobacterial biomaterials and resources for researchers

Manzour Hernando Hazbón , Leen Rigouts , Marco Schito , Matthew Ezewudo , Takuji Kudo et al.
Foodborne Pathogens and Disease, 2018, 76 (4), ⟨10.1093/femspd/fty042⟩
Journal articles pasteur-01986667v1

Viral exanthema in the Americas during the SARS‐CoV‐2 pandemic infection: dengue or COVID‐19?

Nadège Cordel , Geoffrey Grotta , Stéphanie Guyomard , Cécile Herrmann‐storck
International Journal of Dermatology, 2021, 60 (6), pp.751-753. ⟨10.1111/IJD.15421⟩
Journal articles hal-03342504v1

Levels of insecticide resistance to deltamethrin, malathion, and temephos, and associated mechanisms in Aedes aegypti mosquitoes from the Guadeloupe and Saint Martin islands (French West Indies)

Daniella Goindin , Christelle Delannay , Andric Gelasse , Cédric Ramdini , Thierry Gaude et al.
Infectious Diseases of Poverty, 2017, 6 (1), ⟨10.1186/s40249-017-0254-x⟩
Journal articles hal-02359371v1

Combined Genotypic, Phylogenetic, and Epidemiologic Analyses of Mycobacterium tuberculosis Genetic Diversity in the Rhône Alpes Region, France

Catherine Pichat , David Couvin , Gérard Carret , Isabelle Frédénucci , Véronique Jacomo et al.
PLoS ONE, 2016, 11 (4), pp.e0153580. ⟨10.1371/journal.pone.0153580⟩
Journal articles hal-01910925v1

Environmental reservoirs of ECC clusters VIII in Guadeloupe, French West Indies

M. Pot , Y Reynaud , S. Ferdinand , Sebastien Breurec , Pierre Legreneur et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference poster hal-02435039v1

Beneficial micro-organisms for corals (BMC) health investigation within Porites astreoides dominant caribbean coral reef species microbiome

Daniella Goindin , J. Henrich Bruggemann , Mireille Guillaume , Laetitia Hedouin , Veronique Berteaux-Lecellier et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference poster hal-02425452v1

Klebsiella pneumoniae from humans, animals and the environment in Guadeloupe: first insights into genomic

Gaelle Gruel , S. Pazzé , Stéphanie Guyomard-Rabenirina , Séverine Ferdinand , S. Bastian et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France.
Conference poster hal-02425798v1

Spacer-Based Macroarrays for CRISPR Genotyping

Igor Mokrousov , Nalin Rastogi
Methods in Molecular Biology, 2015, 1311, pp.111-131. ⟨10.1007/978-1-4939-2687-9_7⟩
Journal articles pasteur-01153974v1

Intrinsic ability of cuban Aedes aedypti populations to transmit Dengue, Chikungunya and Zika viruses

G. Gutierrez , Antoine Boullis , Y. Martínez , Lyza Hery , M.M. Rodriguez et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference papers hal-02425802v1

Cartography of free-living amoebae in Guadeloupe using metagenomics

Yann Reynaud , Célia Ducat , Talarmin Antoine , Isabel Marcelino
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France
Conference papers hal-02453230v1

La leptospirose en Guyane française et sur le bouclier des Guyanes. État des connaissances en 2016

Loïc Epelboin , Pascale Bourhy , P. Le Turnier , Roxane Schaub , E. Mosnier et al.
Bulletin de la Société de pathologie exotique , 2017, 110 (3), pp.165 - 179. ⟨10.1007/s13149-017-0559-9⟩
Journal articles hal-01844888v1

Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage.

Matthias Merker , Camille Blin , Stefano Mona , Nicolas Duforet-Frebourg , Sophie Lecher et al.
Nature Genetics, 2015, 47 (3), pp.242-249. ⟨10.1038/ng.3195⟩
Journal articles pasteur-01153552v1

Épidémiologie des infections à mycobactéries non tuberculeuses d’expression respiratoire en Guyane française, étude rétrospective 2008–2018

M. Chaptal , Claire Andréjak , T. Bonifay , G. Guillot , M. Boutrou et al.
Revue des Maladies Respiratoires Actualites, 2020, 12 (1), pp.17-18. ⟨10.1016/j.rmra.2019.11.023⟩
Journal articles inserm-03028256v1

Cartography of Free-Living Amoebae in Soil in Guadeloupe (French West Indies) Using DNA Metabarcoding

Yann Reynaud , Célia Ducat , Antoine Talarmin , Isabel Marcelino
Pathogens, 2020, 9 (6), pp.440. ⟨10.3390/pathogens9060440⟩
Journal articles hal-02881659v1

Epidemiology of Infection by Pulmonary Non-Tuberculous Mycobacteria in French Guiana 2008-2018.

Milène Chaptal , Claire Andrejak , Timothée Bonifay , Emmanuel Beillard , Geneviève Guillot et al.
PLoS Neglected Tropical Diseases, 2022, 16 (9), pp.e0010693. ⟨10.1371/journal.pntd.0010693⟩
Journal articles hal-03779209v1

Multidrug-Resistant Mycobacterium tuberculosis of the Latin American Mediterranean Lineage, Wrongly Identified as Mycobacterium pinnipedii (Spoligotype International Type 863 [SIT863]), Causing Active Tuberculosis in South Brazil.

Elis R Dalla Costa , Sidra E G Vasconcelos , Leonardo S Esteves , Harrison M Gomes , Lia L Gomes et al.
Journal of Clinical Microbiology, 2015, 53 (12), pp.3805-3811. ⟨10.1128/JCM.02012-15⟩
Journal articles pasteur-01304581v1