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Dissemination of multidrug resistant Acinetobacter baumannii in various hospitals of Antananarivo Madagascar.

Tahiry S Andriamanantena , Elisoa Ratsima , Hanitra C Rakotonirina , Frédérique Randrianirina , Lovasoa Ramparany et al.
Annals of Clinical Microbiology and Antimicrobials, 2010, 9, pp.17. ⟨10.1186/1476-0711-9-17⟩
Journal articles pasteur-00510777v1
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Prevalence of Latin-American-Mediterranean genetic family in population structure of Mycobacterium tuberculosis in Bulgaria

Violeta Valcheva , Nalin Rastogi , Igor Mokrousov
International Journal of Mycobacteriology, 2015, 4 (3), pp.191-195. ⟨10.1016/j.ijmyco.2015.04.003⟩
Journal articles pasteur-01154025v2
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The Association between Mycobacterium Tuberculosis Genotype and Drug Resistance in Peru

Louis Grandjean , Tomotada Iwamoto , Anna Lithgow , Robert H Gilman , Kentaro Arikawa et al.
PLoS ONE, 2015, 10 (5), pp.e0126271. ⟨10.1371/journal.pone.0126271⟩
Journal articles pasteur-01154027v1
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The genotypic population structure of Mycobacterium tuberculosis complex from Moroccan patients reveals a predominance of Euro-American lineages.

Ouafae Lahlou , Julie Millet , Imane Chaoui , Radia Sabouni , Abdelkarim Filali-Maltouf et al.
PLoS ONE, 2012, 7 (10), pp.e47113. ⟨10.1371/journal.pone.0047113⟩
Journal articles pasteur-00765837v1
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Snapshot of the genetic diversity of Mycobacterium tuberculosis isolates in Iraq

Mohanad Mohsin Ahmed , Suhad Hadi Mohammed , Hasan A. Abood Nasurallah , Mousa M Ali , David Couvin et al.
International Journal of Mycobacteriology, 2014, 3 (3), pp.184-196. ⟨10.1016/j.ijmyco.2014.07.006⟩
Journal articles pasteur-02949754v1
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Mycobacterium tuberculosis Beijing Genotype Is Associated with HIV Infection in Mozambique.

Sofia O Viegas , Adelina Machado , Ramona Groenheit , Solomon Ghebremichael , Alexandra Pennhag et al.
PLoS ONE, 2013, 8 (8), pp.e71999. ⟨10.1371/journal.pone.0071999⟩
Journal articles pasteur-00870731v1
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Molecular diversity of Mycobacterium tuberculosis isolates from patients with tuberculosis in Honduras.

Senia Rosales , Lelany Pineda-García , Solomon Ghebremichael , Nalin Rastogi , Sven E Hoffner et al.
BMC Microbiology, 2010, 10, pp.208. ⟨10.1186/1471-2180-10-208⟩
Journal articles pasteur-00511163v1
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Use of cluster-graphs from spoligotyping data to study genotype similarities and a comparison of three indices to quantify recent tuberculosis transmission among culture positive cases in French Guiana during a eight year period.

Vanina Guernier , Christophe Sola , Karine Brudey , Jean-François Guégan , Nalin Rastogi et al.
BMC Infectious Diseases, 2008, 8, pp.46. ⟨10.1186/1471-2334-8-46⟩
Journal articles hal-00354529v1
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La mise en place de bases de données des génotypes circulants du complexe Mycobacterium tuberculosis et des outils web permettant de mieux surveiller, comprendre et contrôler l'épidémie de la tuberculose dans le monde

David Couvin , Nalin Rastogi
EuroReference - Les Cahiers de la Référence, 2014, 2014 (12), pp. 40-53
Journal articles pasteur-01044645v1
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Highlighting the genetic and epidemiologic disparities of Mycobacterium tuberculosis epidemic in 12 Caribbean territories in a first global study

Julie Millet , Shirematee Baboolal , Nalin Rastogi
Institut Pasteur International Network Annual Scientific Meeting, Hong Kong, 22-23 November 2010, Nov 2010, Hong Kong SAR China. pp.P81, ⟨10.1186/1753-6561-5-S1-P81⟩
Conference papers pasteur-00694608v1
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Genetic Characterization of Mycobacterium tuberculosis in the West Bank, Palestinian Territories.

Suheir Ereqat , Abedelmajeed Nasereddin , Kifaya Azmi , Ziad Abdeen , Charles L Greenblatt et al.
BMC Research Notes, 2012, 5 (1), pp.270. ⟨10.1186/1756-0500-5-270⟩
Journal articles pasteur-00708383v1
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Strain diversity of Mycobacterium tuberculosis isolates from pulmonary tuberculosis patients in Afar pastoral region of Ethiopia.

Mulugeta Belay , Gobena Ameni , Gunnar Bjune , David Couvin , Nalin Rastogi et al.
BioMed Research International , 2014, 2014, Article ID 238532, 12 p. ⟨10.1155/2014/238532⟩
Journal articles pasteur-01011024v1
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A systematic follow-up of Mycobacterium tuberculosis drug-resistance and associated genotypic lineages in the French Departments of the Americas over a seventeen-year period.

Julie Millet , Elisabeth Streit , Mylène Berchel , Anne-Gaël Bomer , Franziska Schuster et al.
BioMed Research International , 2014, 2014, Article ID 689852, 14 p. ⟨10.1155/2014/689852⟩
Journal articles pasteur-01011075v1
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A first insight on the population structure of Mycobacterium tuberculosis complex as studied by spoligotyping and MIRU-VNTRs in Santiago, Chile.

María Elvira Balcells , Patricia García , Paulina Meza , Carlos Peña , Marcela Cifuentes et al.
PLoS ONE, 2015, 10 (2), pp.e0118007. ⟨10.1371/journal.pone.0118007⟩
Journal articles pasteur-01153988v1
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Mycobacterium tuberculosis spoligotypes in Monterrey, Mexico.

Carmen A Molina-Torres , Elisa Moreno-Torres , Jorge Ocampo-Candiani , Adrian Rendon , Kym Blackwood et al.
Journal of Clinical Microbiology, 2010, 48 (2), pp.448-55. ⟨10.1128/JCM.01894-09⟩
Journal articles pasteur-00511722v1
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Multidrug-resistant Mycobacterium tuberculosis strain from Equatorial Guinea detected in Spain.

Patricia Gavín , Maria J Iglesias , Maria S Jiménez , Laura Herrera-Leon , Elena Rodríguez-Valín et al.
Emerging Infectious Diseases, 2009, 15 (11), pp.1858-1860. ⟨10.3201/eid1511.090449⟩
Journal articles pasteur-00511967v1
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Genetic diversity of Mycobacterium tuberculosis in Peru and exploration of phylogenetic associations with drug resistance.

Patricia Sheen , David Couvin , Louis Grandjean , Mirko Zimic , Maria Dominguez et al.
PLoS ONE, 2013, 8 (6), pp.e65873. ⟨10.1371/journal.pone.0065873⟩
Journal articles pasteur-00870729v1
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Heterogeneity among Mycobacterium ulcerans from French Guiana Revealed by Multilocus Variable Number Tandem Repeat Analysis (MLVA).

Yann Reynaud , Julie Millet , David Couvin , Nalin Rastogi , Christopher Brown et al.
PLoS ONE, 2015, 10 (2), pp.e0118597. ⟨10.1371/journal.pone.0118597⟩
Journal articles pasteur-01133543v1
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A first assessment of Mycobacterium tuberculosis genetic diversity and drug-resistance patterns in twelve Caribbean territories.

Julie Millet , Shirematee Baboolal , Elisabeth Streit , Patrick E Akpaka , Nalin Rastogi et al.
BioMed Research International , 2014, 2014, Article ID 718496, 11 p. ⟨10.1155/2014/718496⟩
Journal articles pasteur-01011078v1
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Predominance of Uganda genotype of Mycobacterium tuberculosis isolated from Ugandan patients with tuberculous lymphadenitis.

Dan Wamala , Moses Okee , Edgar Kigozi , David Couvin , Nalin Rastogi et al.
BMC Research Notes, 2014, 8, pp.398. ⟨10.1186/s13104-015-1362-y⟩
Journal articles pasteur-01304577v1
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The establishment of databases on circulating genotypes of Mycobacterium tuberculosis complex and web tools for an effective response to better monitor, understand and control the tuberculosis epidemic worldwide.

David Couvin , Nalin Rastogi
EuroReference - Les Cahiers de la Référence, 2014, 2014 (12), pp.36-48
Journal articles pasteur-02954167v1
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Multidrug-resistant tuberculosis in Port-au-Prince, Haiti.

Oksana Ocheretina , Willy Morose , Marie Gauthier , Patrice Joseph , Richard d'Meza et al.
Pan American Journal of Public Health / Revista Panamericana de Salud Pública, 2012, 31 (3), pp.221-224. ⟨10.1590/s1020-49892012000300006⟩
Journal articles pasteur-00708382v1
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Tuberculosis pandemic and dissemination of drug resistant strains: a challenge for Bulgaria

Violeta Valcheva , Igor Mokrousov , Olga Narvskaya , Nalin Rastogi , Nadya Markova et al.
Institut Pasteur International Network Annual Scientific Meeting, Nov 2010, France. pp.P83, ⟨10.1186/1753-6561-5-S1-P83⟩
Conference papers pasteur-00694611v1
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Mycobacterium tuberculosis strains potentially involved in the TB epidemic in Sweden a century ago.

Ramona Groenheit , Solomon Ghebremichael , Alexandra Pennhag , Jerker Jonsson , Sven Hoffner et al.
PLoS ONE, 2012, 7 (10), pp.e46848. ⟨10.1371/journal.pone.0046848⟩
Journal articles pasteur-00765836v1
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Automated extraction and amplification for direct detection of Mycobacterium tuberculosis complex in various clinical samples.

Christine Simonnet , Vincent Lacoste , Anne Sophie Drogoul , Nalin Rastogi
Journal of Clinical Microbiology, 2011, 49 (4), pp.1700-1. ⟨10.1128/JCM.02150-10⟩
Journal articles pasteur-00619820v1
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Strain Classification of Mycobacterium tuberculosis Isolates in Brazil Based on Genotypes Obtained by Spoligotyping, Mycobacterial Interspersed Repetitive Unit Typing and the Presence of Large Sequence and Single Nucleotide Polymorphism

Sidra E. G. Vasconcellos , Chyntia Carolina Acosta , Lia Lima Gomes , Emilyn Costa Conceicao , Karla Valéria Lima et al.
PLoS ONE, 2014, 9 (10), pp.e107747. ⟨10.1371/journal.pone.0107747⟩
Journal articles pasteur-01153012v1
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MLVA based classification of Mycobacterium tuberculosis complex lineages for a robust phylogeographic snapshot of its worldwide molecular diversity

Véronique Hill , Thierry Zozio , Syndia Sadikalay , Sofia Viegas , Elisabeth Streit et al.
PLoS ONE, 2012, 7 (9), pp.e41991. ⟨10.1371/journal.pone.0041991⟩
Journal articles pasteur-00765833v1
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Evolution and diversity of clonal bacteria: the paradigm of Mycobacterium tuberculosis.

Tiago dos Vultos , Olga Mestre , Jean Rauzier , Marcin Golec , Nalin Rastogi et al.
PLoS ONE, 2008, 3 (2), pp.e1538. ⟨10.1371/journal.pone.0001538⟩
Journal articles pasteur-00364652v1
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Survey of Naegleria fowleri in Geothermal Recreational Waters of Guadeloupe (French West Indies).

Mirna Moussa , Johan F de Jonckheere , Jérôme Guerlotté , Vincent Richard , Alexandra Bastaraud et al.
PLoS ONE, 2013, 8 (1), pp.e54414. ⟨10.1371/journal.pone.0054414⟩
Journal articles pasteur-00782031v1
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The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: Providing guidelines for Quality Assurance when working on membranes

Edgar Abadia , Jian Zhang , Viviana Ritacco , Kristin Kremer , Raymond Ruimy et al.
BMC Infectious Diseases, 2011, 11 (1), pp.110. ⟨10.1186/1471-2334-11-110⟩
Journal articles pasteur-00670610v1