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Environmental vulnerability of the global ocean epipelagic plankton community interactome

Samuel Chaffron , Erwan Delage , Marko Budinich , Damien Vintache , Nicolas Henry et al.
Science Advances , 2021, 7 (35), pp.eabg1921. ⟨10.1126/sciadv.abg1921⟩
Journal articles hal-03443359v2
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OcéanIA: AI, Data, and Models for Understanding the Ocean and Climate Change

Nayat Sanchez-Pi , Luis Marti , Julien Salomon , Jacques Sainte-Marie , Olivier Bernard et al.
pp.1-64, 2021
Books hal-03274323v2
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Fecal Supernatant from Adult with Autism Spectrum Disorder Alters Digestive Functions, Intestinal Epithelial Barrier, and Enteric Nervous System

Jacques Gonzales , Justine Marchix , Laetitia Aymeric , Catherine Le Berre-Scoul , Johanna Zoppi et al.
Microorganisms, 2021, 9 (8), pp.1723. ⟨10.3390/microorganisms9081723⟩
Journal articles hal-03637249v1
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Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean

Marta Royo-Llonch , Pablo Sánchez , Clara Ruiz-González , Guillem Salazar , Carlos Pedrós-Alió et al.
Nature Microbiology, 2021, 6 (12), pp.1561-1574. ⟨10.1038/s41564-021-00979-9⟩
Journal articles hal-03781908v1
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Sorting by Multi-Cut Rearrangements

Laurent Bulteau , Guillaume Fertin , Géraldine Jean , Christian Komusiewicz
Algorithms, 2021, 14 (6), pp.169. ⟨10.3390/a14060169⟩
Journal articles hal-03388451v1
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MiBiOmics: an interactive web application for multi-omics data exploration and integration

Johanna Zoppi , Jean-François Guillaume , Michel Neunlist , Samuel Chaffron
BMC Bioinformatics, 2021, 22 (1), ⟨10.1186/s12859-020-03921-8⟩
Journal articles hal-03101013v1
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A community perspective on the concept of marine holobionts: current status, challenges, and future directions

Simon M. Dittami , Enrique Arboleda , J.-C. Auguet , Arite Bigalke , Enora Briand et al.
PeerJ, 2021, 9, pp.e10911. ⟨10.7717/peerj.10911⟩
Journal articles hal-03166872v2
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The Maximum Colorful Arborescence problem: How (computationally) hard can it be?

Guillaume Fertin , Julien Fradin , Géraldine Jean
Theoretical Computer Science, 2021, 852, pp.104-120. ⟨10.1016/j.tcs.2020.11.021⟩
Journal articles hal-03346859v1
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Chromatin accessibility combined with enhancer clusters activation mediates heterogeneous response to dexamethasone in myeloma cells

Victor Gaborit , Jonathan Cruard , Catherine Guérin-Charbonnel , Jennifer Derrien , Jean-Baptiste Alberge et al.
Preprints, Working Papers, ... inserm-03364330v1
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Decline in plankton diversity and carbon flux with reduced sea ice extent along the Western Antarctic Peninsula

Yajuan Lin , Carly Moreno , Adrian Marchetti , Hugh Ducklow , Oscar Schofield et al.
Nature Communications, 2021, 12, pp.4948. ⟨10.1038/s41467-021-25235-w⟩
Journal articles hal-03389081v1
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Large-scale regulatory and signaling network assembly through linked open data

Marie Lefebvre , Alban Gaignard , Maxime Folschette , Jérémie Bourdon , Carito Guziolowski et al.
Database - The journal of Biological Databases and Curation, 2021, 2021, pp.baaa113. ⟨10.1093/database/baaa113⟩
Journal articles hal-03107317v2
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Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean

Hiroto Kaneko , Romain Blanc-Mathieu , Hisashi Endo , Samuel Chaffron , Tom Delmont et al.
iScience, 2021, 24 (1), pp.102002. ⟨10.1016/j.isci.2020.102002⟩
Journal articles hal-03097258v3
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Quantitative Assessment of Nucleocytoplasmic Large DNA Virus and Host Interactions Predicted by Co-occurrence Analyses

Lingjie Meng , Hisashi Endo , Romain Blanc-Mathieu , Samuel Chaffron , Rodrigo Hernández-Velázquez et al.
MSphere, 2021, 6 (2), ⟨10.1128/mSphere.01298-20⟩
Journal articles hal-03214058v1
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Disentangling microbial networks across pelagic zones in the global ocean

Ina M Deutschmann , Erwan Delage , Caterina R Giner , Marta Sebastián , Julie Poulain et al.
Preprints, Working Papers, ... hal-03855706v1
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Investigating the microbial ecology of coastal hotspots of marine nitrogen fixation in the western North Atlantic

Seaver Wang , Weiyi Tang , Erwan Delage , Scott Gifford , Hannah Whitby et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-84969-1⟩
Journal articles hal-03166895v1
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Dietary switch to Western diet induces hypothalamic adaptation associated with gut microbiota dysbiosis in rats

Mélanie Fouesnard , Johanna Zoppi , Mélanie Pétéra , Léa Le Gleau , Carole Migné et al.
International Journal of Obesity, 2021, 45 (6), pp.1271-1283. ⟨10.1038/s41366-021-00796-4⟩
Journal articles hal-03171983v1