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Computational Discovery of Dynamic Cell Line Specific Boolean Networks from Multiplex Time-Course Data
Misbah Razzaq
,
Loïc Paulevé
,
Anne Siegel
,
Julio Saez-Rodriguez
,
Jérémie Bourdon
et al.
Journal articles
hal-01897020v1
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Mechanically induced development and maturation of human intestinal organoids in vivo
Holly Poling
,
David Wu
,
Nicole Brown
,
Michael Baker
,
Taylor Hausfeld
et al.
Journal articles
hal-01816387v1
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Traceability, reproducibility and wiki-exploration for "à-la-carte" reconstructions of genome-scale metabolic models
Méziane Aite
,
Marie Chevallier
,
Clémence Frioux
,
Camille Trottier
,
Jeanne Got
et al.
Journal articles
hal-01807842v1
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Discriminate the response of Acute Myeloid Leukemia patients to treatment by using proteomics data and Answer Set Programming
Lokmane Chebouba
,
Bertrand Miannay
,
Dalila Boughaci
,
Carito Guziolowski
Journal articles
hal-01988426v1
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Population-level analysis of Blastocystis subtype prevalence and variation in the human gut microbiota
Raul Tito
,
Samuel Chaffron
,
Clara Caenepeel
,
Gipsi Lima-Mendez
,
Jun Wang
et al.
Journal articles
hal-01893208v1
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Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience
Dinka Mandakovic
,
Claudia Rojas
,
Jonathan Maldonado
,
Mauricio Latorre
,
Dante Travisany
et al.
Journal articles
hal-01774624v1
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The Use of Next Generation Sequencing for Improving Food Safety: Translation into practice
Balamurugan Jagadeesan
,
Peter Gerner-Smidt
,
Marc Allard
,
Sébastien Leuillet
,
Anett Winkler
et al.
Journal articles
hal-01934206v1
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Identification of transcription factors involved in the phenotype of a domesticated oleaginous microalgae strain of Tisochrysis lutea
S. Thiriet-Rupert
,
Gregory Carrier
,
C. Trottier
,
Damien Eveillard
,
B. Schoefs
et al.
Journal articles
hal-01677336v1
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Constraints on signaling network logic reveal functional subgraphs on Multiple Myeloma OMIC data
Bertrand Miannay
,
Stéphane Minvielle
,
Florence Magrangeas
,
Carito Guziolowski
Journal articles
inserm-01804825v1
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Logic and Linear programs to understand cancer response
Misbah Razzaq
,
Lokmane Chebouba
,
Pierre Le Jeune
,
Hanen Mhamdi
,
Carito Guziolowski
et al.
2018
Preprints, Working Papers, ...
hal-01897036v1
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Complex graphs in biology : problems, algorithms and evaluation
Julien Fradin
Bio-informatique [q-bio.QM]. Université de Nantes, Faculté des sciences et des techniques; Ecole Doctorale MATHSTIC, 2018. Français. ⟨NNT : ⟩
Theses
tel-02081176v1
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Scalable and exhaustive screening of metabolic functions carried out by microbial consortia
Clémence Frioux
,
Enora Fremy
,
Camille Trottier
,
Anne Siegel
ECCB - 2018 - 17th European Conference on Computational Biology, Sep 2018, Athènes, Greece. pp.i934-i943
Conference papers
hal-01946860v1
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Integrating phosphoproteomic time series data into prior knowledge networks
Misbah Razzaq
Theses
tel-02021019v1
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Therapeutic target discovery using Boolean network attractors: improvements of kali
Arnaud Poret
,
Carito Guziolowski
Journal articles
hal-01395079v3
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