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Sorting permutations by prefix and suffix rearrangements
Carla Negri Lintzmayer
,
Guillaume Fertin
,
Zanoni Dias
Journal articles
hal-01524046v1
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Modelling plankton ecosystems in the meta-omics era. Are we ready?
Krzysztof Franciszek Stec
,
Luigi Caputi
,
Pier Luigi Buttigieg
,
Domenico d'Alelio
,
Federico Matias Ibarbalz
et al.
Journal articles
hal-01584309v1
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Plankton networks correlated to the biological carbon pump in the global ocean
A.S. Benoiston
,
L. Bittner
,
Lionel Guidi
,
S. Chaffron
,
D. Eveillard
et al.
Journée analyse des réseau, GDR génomique environnementale, 2017, Nantes, France
Conference papers
hal-04024048v1
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SpecOMS: A Full Open Modification Search Method Performing All-to-All Spectra Comparisons within Minutes
Matthieu David
,
Guillaume Fertin
,
Helene Rogniaux-Bonaventure
,
Dominique Tessier
Journal articles
hal-01607343v1
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A Logic for Checking the Probabilistic Steady-State Properties of Reaction Networks
Vincent Picard
,
Anne Siegel
,
Jérémie Bourdon
Journal articles
hal-01552190v1
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Odd Gossiping
Guillaume Fertin
,
Joseph G. Peters
,
Lynette Raabe
,
Charlie Xu
Journal articles
hal-01314648v1
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On the Power of Uncertainties in Microbial System Modeling: No Need To Hide Them Anymore
Benoît Delahaye
,
Damien Eveillard
,
Nicholas Bouskill
Journal articles
hal-01658218v1
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Toward a better understanding of the plant microbiota
Victoria Potdevin
,
Marie Chevallier
,
Ruben Garrido Oter
,
Anne Siegel
,
Stéphane Hacquard
et al.
4ème colloque de Génomique Environnementale, GDR Génomique Environnementale, Sep 2017, Marseille, France
Conference papers
hal-01576743v1
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A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems.
Marko Budinich
,
Jérémie Bourdon
,
Abdelhalim Larhlimi
,
Damien Eveillard
PLoS ONE, 2017, 12 (2), pp.e0171744
Journal articles
hal-01478375v1
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Graph matching problems and the NP-hardness of sortedness constraints
Irena Rusu
Journal articles
hal-01708356v1
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The Contig Assembly Problem and Its Algorithmic Solutions
Géraldine Jean
,
Andreea Radulescu
,
Irena Rusu
Algorithms for Next-Generation Sequencing Data, pp. 267-298, 2017
Book sections
hal-01819204v1
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caspo: a toolbox for automated reasoning on the response of logical signaling networks families
Santiago Videla
,
Julio Saez-Rodriguez
,
Carito Guziolowski
,
Anne Siegel
Journal articles
hal-01426880v1
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log-Lists and their applications to sorting by transpositions, reversals and block-interchanges
Irena Rusu
Journal articles
hal-01708351v1
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Algorithmic Aspects of the Maximum Colorful Arborescence Problem
Guillaume Fertin
,
Julien Fradin
,
Géraldine Jean
Conference papers
hal-01524069v1
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Toward the study of metabolic functions in algal holobionts
Claire Lippold
,
Camille Trottier
,
Clémence Frioux
,
Marie Chevallier
,
Simon M Dittami
et al.
4ème Colloque de Génomique Environnementale, Sep 2017, Marseille, France
Conference papers
hal-01576484v1
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L'écologie des systèmes
Damien Eveillard
,
Anne Siegel
,
Philippe Vandenkoornhuyse
Mokrane Bouzeghoub et Rémy Mosseri. Les Big Data à Découvert, CNRS éditions, 2017, 978-2-271-11464-8
Book sections
hal-01575603v1
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