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Expression and Biological Activity of the Cystine Knot Bioinsecticide PA1b (Pea Albumin 1 Subunit b).

Vanessa Eyraud , Lamis Karaki , Isabelle Rahioui , Catherine Sivignon , Pedro da Silva et al.
PLoS ONE, 2013, 8 (12), pp.e81619. ⟨10.1371/journal.pone.0081619⟩
Journal articles hal-00921788v1
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The Genome of Cardinium cBtQ1 Provides Insights into Genome Reduction, Symbiont Motility, and Its Settlement in Bemisia tabaci

Diego Santos-Garcia , Pierre-Antoine Rollat-Farnier , Francisco Beitia , Einat Zchori-Fein , Fabrice Vavre et al.
Genome Biology and Evolution, 2014, 6 (4), pp.1013-1030
Journal articles hal-01092610v1
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AphidAtlas : avancées récentes

Anthony Bretaudeau , Olivier Dameron , Fabrice Legeai , Yvan Rahbé
BAPOA 2013 MOP, Oct 2013, Montpellier, France
Conference papers hal-00913155v1
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New insight into the RNA interference response against cathepsin-L gene in the pea aphid, Acyrthosiphon pisum: Molting or gut phenotypes specifically induced by injection or feeding treatments.

Panagiotis Sapountzis , Gabrielle Duport , Severine Balmand , Karen Gaget , Stéphanie Jaubert-Possamai et al.
Insect Biochemistry and Molecular Biology, 2014, 51, to be published. ⟨10.1016/j.ibmb.2014.05.005⟩
Journal articles hal-01002574v1
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Two Host Clades, Two Bacterial Arsenals: Evolution through Gene Losses in Facultative Endosymbionts.

Pierre-Antoine Rollat-Farnier , Diego Santos-Garcia , Qiong Rao , Marie-France Sagot , Francisco J Silva et al.
Genome Biology and Evolution, 2015, 7 (3), pp.839-855. ⟨10.1093/gbe/evv030⟩
Journal articles hal-01139507v1
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Reference-free detection of isolated SNPs

Raluca Uricaru , Guillaume Rizk , Vincent Lacroix , Elsa Quillery , Olivier Plantard et al.
Nucleic Acids Research, 2014, 43 (2), pp.e11. ⟨10.1093/nar/gku1187⟩
Journal articles hal-01083715v1
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Using cascading Bloom filters to improve the memory usage for de Brujin graphs

Kamil Salikhov , Gustavo Sacomoto , Gregory Kucherov
Algorithms for Molecular Biology, 2014, 9 (1), pp.2. ⟨10.1186/1748-7188-9-2⟩
Journal articles hal-00971576v1
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Genomic regions harboring insecticide resistance-associated Cyp genes are enriched by transposable element fragments carrying putative transcription factor binding sites in two sibling Drosophila species

Claudia M A Carareto , Eric H Hernandez , Cristina Vieira
Gene, 2014, 537 (1), pp.93-99. ⟨10.1016/j.gene.2013.11.080⟩
Journal articles hal-00922703v1
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Biosynthesis of vitamins and cofactors in bacterium-harbouring trypanosomatids depends on the symbiotic association as revealed by genomic analyses

Cecilia C Klein , João M P Alves , Myrna G Serrano , Gregory A Buck , Ana Tereza R Vasconcelos et al.
PLoS ONE, 2013, 8 (11), pp.e79786. ⟨10.1371/journal.pone.0079786⟩
Journal articles hal-00922587v1
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Metabolic Investigation of the Mycoplasmas from the Swine Respiratory Tract

Mariana Galvao Ferrarini
Bioinformatics [q-bio.QM]. Université Claude Bernard - Lyon I, 2015. English. ⟨NNT : 2015LYO10302⟩
Theses tel-01315159v1
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Tyrosine pathway regulation is host-mediated in the pea aphid symbiosis during late embryonic and early larval development

Andréane Rabatel , Gérard Febvay , Karen Gaget , Gabrielle Duport , Patrice Baa-Puyoulet et al.
BMC Genomics, 2013, 14 (1), pp.235. ⟨10.1186/1471-2164-14-235⟩
Journal articles hal-00824527v1
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Aphid Resistance in Florist's Chrysanthemum (Chrysanthemum morifolium Ramat.) Induced by Sea Anemone Equistatin Overexpression

Mahmood Valizadeh , C. Deraison , S.K. Kazemitabar , Yvan Rahbé , Maarten A Jongsma et al.
African Journal of Biotechnology, 2013, 12 (50), pp.12(50):6922-6930. ⟨10.5897/AJB2013.12956⟩
Journal articles hal-00919389v1
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Endosymbiont diversity among sibling weevil species competing for the same resource

Adrien Merville , Samuel Venner , Hélène Henri , Agnès Vallier , Frédéric Menu et al.
BMC Evolutionary Biology, 2013, 13, pp.28. ⟨10.1186/1471-2148-13-28⟩
Journal articles hal-00850306v1
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Bioinformatic study of the metabolic dialog between a non-pathogenic trypanosomatid and its endosymbiont with evolutionary and functional goals

Cecilia Coimbra Klein
Quantitative Methods [q-bio.QM]. Université Claude Bernard - Lyon I, 2013. English. ⟨NNT : 2013LYO10208⟩
Theses tel-01050338v1
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Short and long-term genome stability analysis of prokaryotic genomes

Matteo Brilli , Pietro Liò , Vincent Lacroix , Marie-France Sagot
BMC Genomics, 2013, 14 (1), pp.309. ⟨10.1186/1471-2164-14-309⟩
Journal articles hal-00834426v1
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Signs of Neutralization in a Redundant Gene Involved in Homologous Recombination in Wolbachia Endosymbionts

Myriam Badawi , Isabelle Giraud , Fabrice Vavre , Pierre Grève , Richard Cordaux et al.
Genome Biology and Evolution, 2014, 10 (6), pp.2654-2664. ⟨10.1093/gbe/evu207⟩
Journal articles hal-01091858v1
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Manipulation of arthropod sex determination by endosymbionts: diversity and molecular mechanisms

Wen-Juan Ma , Fabrice Vavre , Leo W. Beukeboom
Sexual Development, 2014, pp.59-73
Journal articles hal-01092616v1
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Rime: Repeat identification

Maria Federico , Pierre Peterlongo , Nadia Pisanti , Marie-France Sagot
Discrete Applied Mathematics, 2014, 163 (3), pp.275-286. ⟨10.1016/j.dam.2013.02.016⟩
Journal articles hal-00802023v1
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Biotype status and resistance to neonicotinoids and carbosulfan in Bemisia tabaci (Hemiptera: Aleyrodidae) in Burkina Faso, West Africa

Olivier Gnankine , Laurence Mouton , Aly Savadogo , Thibaud Martin , Antoine Sanon et al.
International Journal of Pest Management, 2013, 59 (2), pp.95-102. ⟨10.1080/09670874.2013.771806⟩
Journal articles hal-01916766v1
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MiRNA and co: Methodologically exploring the world of small RNAs

Susan Higashi
Bioinformatics [q-bio.QM]. Universite Claude Bernard Lyon 1, 2014. English. ⟨NNT : ⟩
Theses tel-01096833v1
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SymbAphidBase: a new database dedicated to aphid symbionts to store novel sequenced genomes and standardize their annotations

Mathieu Labernardiere , Patrice Baa-Puyoulet , Jean-Pierre Gauthier , Gérard Febvay , Federica Calevro et al.
13. European Conference on Computational Biology (ECCB), Sep 2014, Strasbourg, France. , 1 p., 2014
Conference poster hal-02798649v1
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Epidemiology of asexuality induced by the endosymbiotic Wolbachia across phytophagous wasp species: host plant specialization matters.

Thomas Boivin , Hélène Henri , Fabrice Vavre , Cindy Gidoin , Philippe Veber et al.
Molecular Ecology Notes, 2014, 23 (9), pp.2362-2375. ⟨10.1111/mec.12737⟩
Journal articles hal-01092614v1
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Microbial impacts on insect evolutionary diversification: from patterns to mechanisms

Fabrice Vavre , Natacha Kremer
Current Opinion in Insect Science, 2014, Molecular physiology/Environmental physiology, 4, pp.29--34. ⟨10.1016/j.cois.2014.08.003⟩
Journal articles hal-01104106v1
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An average study of hypergraphs and their minimal transversals

Julien David , Loïck Lhote , Arnaud Mary , François Rioult
Theoretical Computer Science, 2015, 596, pp.124-141. ⟨10.1016/j.tcs.2015.06.052⟩
Journal articles hal-01086638v1
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Amortized Õ(|V|) -Delay Algorithm for Listing Chordless Cycles in Undirected Graphs

Rui Ferreira , Roberto Grossi , Romeo Rizzi , Gustavo Sacomoto , Marie-France Sagot et al.
22th Annual European Symposium on Algorithms, Sep 2014, Wroclaw, Poland. pp.418-429, ⟨10.1007/978-3-662-44777-2_35⟩
Conference papers hal-01081031v1
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Endothelial, epithelial, and fibroblast cells exhibit specific splicing programs independently of their tissue of origin

Pierre Mallinjoud , Jean-Philippe Villemin , Hussein Mortada , Micaela Polay Espinoza , François-Olivier Desmet et al.
Genome Research, 2014, 24 (3), pp.511-521. ⟨10.1101/gr.162933.113⟩
Journal articles hal-01091290v1
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Distribution of Bemisia tabaci (Homoptera: Aleyrodidae) biotypes and their associated symbiotic bacteria on host plants in West Africa

Olivier Gnankine , Laurence Mouton , Hélène Henri , Gabriel Terraz , Thomas Houndeté et al.
Insect conservation and diversity, 2013, 6 (3), pp.411 - 421. ⟨10.1111/j.1752-4598.2012.00206.x⟩
Journal articles istex hal-01916762v1
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On the identifiability of metabolic network models.

Sara Berthoumieux , Matteo Brilli , Daniel Kahn , Hidde de Jong , Eugenio Cinquemani et al.
Journal of Mathematical Biology, 2013, 67 (6-7), pp.1795-832. ⟨10.1007/s00285-012-0614-x⟩
Journal articles hal-00762620v1
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Variable expression levels detected in the Drosophila effectors of piRNA biogenesis

Marie Fablet , Abdou Akkouche , Virginie Braman , Cristina Vieira
Gene, 2014, 537 (1), pp.149-153. ⟨10.1016/j.gene.2013.11.095⟩
Journal articles hal-00922704v1
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Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci

Qiong Rao , Pierre-Antoine Rollat-Farnier , Dan-Tong Zhu , Diego Santos-Garcia , Francisco J Silva et al.
BMC Genomics, 2015, 16, pp.226. ⟨10.1186/s12864-015-1379-6⟩
Journal articles hal-01139508v1